Please note that all times below refer to British Summer Time (GMT+1)
08:30 – 10:00 hrs | Concurrent Symposia S11-15 & Educational Sessions E11-E12
Room: Hall 5
Chairs: Alex Reymond
S11.1 T2T genomes of multiple individuals
Adam Philippy;
United States
S11.2 Centromere variation and evolution
Glennis Logsdon;
United States
S11.3 The reference genome
Valerie Schneider;
United States
Room: Hall 2
Chairs: Carla Oliveira
S12.1 Patient-derived organs-on-chips as genetic disease models
Donald Ingber;
United States
S12.2 Engineered muscle models of genetic disease
Malte Tiburcy;
Germany
S12.3 Current challenges in developing in vitro stem cell based models for inherited vascular diseases
Franck Lebrin;
Netherlands
Room: Lomond Auditorium
Chairs: Zoltan Kutalik
S13.1 Drug target landscape of immune traits
Julian Knight;
United Kingdom
S13.2 Strategies for the identification of causal variants
Nicole Sorenzo;
Italy
S13.3 The long journey from GWAS SNPs to drug target genes
Brent Richards;
Canada
Room: M1
Chairs: Cristina Rodriguez-Antona
S14.1 Hereditary renal cell carcinoma syndromes
Eamonn R. Maher;
United Kingdom
S14.2 The genetic evolution of Renal Cell Carcinoma
Samra Turajlic;
United Kingdom
S14.3 Molecular genetics and precision medicine in renal cancer
James Brugarolas;
United States
Room: Forth Room
Chairs: Thomas Eggermann
S15.1 Regulation of gene expression in human placenta and its disturbances
David Monk;
United Kingdom
S15.2 Placental dysfunction and pregnancy outcome: an interdisciplinary challenge (view from a prenatal medicine)
Karl Oliver Kagan;
Germany
S15.3 The placenta, reproductive and cardiovascular health: the need for population based placental sciences
Abigail Fraser;
United Kingdom
Room: Clyde Auditorium
Chairs: Kelly Ormond
E11.1 Sex, gender, and pedigrees in clinical genetics: What to record, how to record it, and why
Jehannine Austin;
Canada
E11.2 Gender Affirming Genetics Practices
Kimberly Zayhowski;
United States
Room: Hall 1
Chairs: Karin Writzl and Hülya Kayserili
E12.1 RASopathies: clinical manifestations and therapy
Martin Zenker;
Germany
E12.2 RASopathies: pathways, genes and mechanisms
Marco Tartaglia;
Italy
08:30 – 10:00 hrs | Corporate Satellites
10:00 – 10:30 hrs | Coffee Break, Exhibition, Poster Viewing
10:30 – 12:00 hrs | Concurrent Sessions C16-C23 from submitted abstracts
Room: Hall 5
Chairs: tba
C16.1 Application of RNA sequencing in genetic diagnosis of fetal structural abnormalities
Sze Shing Fan, Hong Kong
C16.2 Biallellic variants in SNAPIN are associated with a novel foetal neuroanatomical phenotype
Maayke de Koning, Netherlands
C16.3 Prenatal exome sequencing in corpus callosum anomalies: lessons from a cohort of 209 fetuses
Anna Gerasimenko, France
C16.4 Prenatal-onset hypertrophic cardiomyopathy in 47 patients with RASopathies: understanding phenotype-genotype correlations for risk stratification, medical management and targeted therapies assessment through an international cohort study
Guillaume Jouret, Luxembourg
C16.5 Maternal age-independent human aneuploidies are common and associated with mitochondrial disfunctions: analysis of 11,610 genomes of human embryos
Natalia Ree, Russian Federation
C16.6 Prenatal and lethal phenotypes of Mendelian disorders: a cross-species comparison
Pilar Cacheiro, United Kingdom
Room: Clyde Auditorium
Chairs: tba
C17.1 Aberrant phase separation and nucleolar dysfunction in rare genetic diseases
Henri Niskanen, Germany
C17.2 Exome copy number variant (CNV) detection, analysis, and curation from 6,678 families with undiagnosed rare genetic disease
Gabrielle Lemire, United States
C17.3 Saturation mutagenesis data facilitate the interpretation of noncoding variants in the IRF6 enhancer associated with nonsyndromic cleft-lip w/o cleft palate
Ronja Hollstein, Germany
C17.4 Assessing tissue-specific effects of rare and structural variants towards gene regulation with the EN-TEx personal genome resource
Matthew Jensen, United States
C17.5 eQTLGen phase 2: Genome-wide trans-eQTL analysis in blood in over 30,000 individuals provides insight into the genetic architecture of molecular traits
Robert Warmerdam, Netherlands
C17.6 Genome-wide evaluation of the effect of short tandem repeat variation on local DNA methylation
Alejandro Martin Trujillo, United States
Room: Hall 2
Chairs: tba
C18.1 Biallelic inactivating variants in DMAP1 underlie a syndromic neurodevelopmental disorder
Dong Li, United States
C18.2 De novo variants in DENND5B perturb intracellular vesicular trafficking and cause neurodevelopmental disorders with epilepsy and white matter abnormalities.
Marcello Scala, Italy
C18.3 Loss-of-function of the Zinc Finger Homeobox 4 (ZFHX4) gene causes a novel neurodevelopmental disorder
María del Rocío Pérez Baca, Belgium
C18.4 A novel neurodevelopment syndrome caused by recessive variants in the FSD1L gene
Valentina Serpieri, Italy
C18.5 LHX2 haploinsufficiency causes a variable neurodevelopmental disorder
Christiane Zweier, Switzerland
C18.6 De novo variants in KCNA3 cause developmental and epileptic encephalopathy
Johannes Lemke, Germany
Room: Lomond Auditorium
Chairs: tba
C19.1 Inferring comprehensive disease signatures with machine learning from UK Biobank biomarkers and other quantitative traits to enhance PheWAS analyses
Manik Garg, United Kingdom
C19.2 Imputation of low-coverage sequencing data from 150,119 UK Biobank genomes
Simone Rubinacci, Switzerland
C19.3 ADuLT: Fast and powerful alternative to time-to-event GWAS
Emil Pedersen, Denmark
C19.4 Fine-mapping genome-wide association studies with missing genotype data
Joonas Kartau, Finland
C19.5 Detection of assortative mating on complex traits in the absence of spousal information
Yuanxiang Zhang, Australia
C19.6 GestaltMatcher supports lumping and splitting decision-making by facial phenotype descriptors
Hannah Klinkhammer, Germany
Room: M1
Chairs: tba
C20.1 Diagnostic yield and short-term clinical implications of nationwide germline whole genome sequencing in 280 children with solid tumors
Bianca Tesi, Sweden
C20.2 Genome-wide polygenic risk scores substantially impact colorectal neoplasm risk with implications for stratified screening
Max Tamlander, Finland
C20.3 Large scale case-control analyses of rare variant data; application to BRCA1 and BRCA2
Denise G. O’Mahony, Cyprus
C20.4 Clinical implications of incorporating genetic and non-genetic risk factors in CanRisk-based breast cancer risk prediction: results from an international multicenter-study
Anja Tüchler, Germany
C20.5 Data from the SWEP53 study: Whole-body MRI surveillance in gTP53 carriers is perceived as beneficial with no increase in cancer worry regardless of previous cancer
Meis Omran, Sweden
C20.6 Integrating Polygenic Risk Scores into clinical breast cancer models improves prediction in diverse cohorts
paolo Di Domenico, Italy
Room: Forth Room
Chairs: tba
More information will follow soon.
Room: Hall 1
Chairs: tba
C22.1 Long-read sequencing reveals novel transcripts induced by misexpression of DUX4 in FSHD muscle
Dongxu Zheng, Netherlands
C22.2 D4Z4 methylation analysis combined with machine learning pipelines: a novel tool for the rapid identification of FSHD subjects
Valerio Caputo, Italy
C22.3 Establishment of the first reported zebrafish model for thoracic aortic dissection and rupture
Michiel Vanhooydonck, Belgium
C22.4 Long-read RNA-sequencing identifies novel protein coding transcripts of genes with implications for inherited and complex cardiac disease
Rhys Dore, United Kingdom
C22.5 Loss-of-function variants in POPDC2 cause a novel autosomal recessive syndrome with sinus node disease and AV conduction defects in combination with hypertrophic cardiomyopathy
Najim Lahrouchi, Netherlands
C22.6 Functional analysis of LDLR variants using automated systems to improve rare-variant association studies and risk assessment in hypercholesterolemia
Simon Pfisterer, Finland
Room: Live Stream Area (Exhibition Hall)
Chairs: Alexandre Reymond and Borut Peterlin
C23.1 Development of methods and tools in NPCs and zebrafish towards modeling of DNA sequence variants in patients with pachygyria by using genome editing technologies
Aykut KURUOGLU, Turkey
C23.2 Elucidating the role of RLS-associated MEIS transcription factors during neural development
Volker KITTKE, Germany
C23.3 Digenic inheritance of STUB1 variants and TBP polyglutamine expansions solves the enigma of SCA17 and SCA48 incomplete penetrance
Stefania MAGRI, Italy
C23.4 Identification of molecular signatures and pathways involved in Rett syndrome-spectrum disorders using a multi-omics approach
Clara XIOL, Spain
C23.5 De novo variants in ATP2B1 lead to neurodevelopment delay
Meer Jacob RAHIMI, Germany
C23.6 Mutation Profile of Metastatic Castration-Resistant Prostate Cancer Patients Prior to Olaparib Treatment – EMA vs. FDA
Vita SETRAJCIC DRAGOS, Slovenia
C23.7 ENIGMA effort to standardize the classification of variants disrupting splicing of in-frame exons using BRCA1 exon 18 as an example
Joanna DOMÈNECH-VIVÓ, Spain
C23.8 Systematic functional analysis by hybrid minigenes of CHEK2 splice-site variants detected in the BRIDGES project
Lara SANOGUERA-MIRALLES, Spain
C23.9 Genetic determinants of mosaic loss of the X chromosome in peripheral leukocytes of 800K women from 7 biobanks
Aoxing LIU, Finland
C23.10 Genetic and environmental determinants of drug adherence
Mattia CORDIOLI, Finland
C23.11 Utilising drug switches as a proxy for angiotensin-converting enzyme inhibitor-induced cough discovers novel genetic signals
Kayesha COLEY, United Kingdom
C23.12 Identification of shared molecular signatures of ageing and metabolic diseases using multi-omic data
Theodora Dafni MICHALETTOU, United Kingdom
C23.13 Multi-tissue TWAS identifies 137 novel gene associations with ageing outcomes in humans
Georgina NAVOLY, United Kingdom
C23.14 Inclusion of sequencing GWAS (seqGWAS) in GWAS Catalog, data format and future challenges
Maria CEREZO, United Kingdom
C23.15 Deconstructing the genetic component of reported trauma with genomic structural equation modelling
Abigail TER KUILE, United Kingdom
12:00 – 13:00 hrs | Lunch Break, Exhibition, Poster Viewing
12:15 – 13:15 hrs | ESHG General Assembly | Room M1
12:00 – 13:00 hrs | Corporate Satellites
13:00 – 14:00 hrs | Poster Viewing with Authors – Group C
14:00 – 15:30 hrs | Workshops W12-W18
Room: Hall 5
Chairs: Elisa Giorgio, Tania Attie-Bitach
Although Next Generation Sequencing (NGS) technologies have enormously increased our capability to diagnose rare genetic diseases (RGDs), the interpretation of the vast majority of identified variants remains a major challenge. In this workshop we will focus on variants identified in a prenatal setting when phenotypic features are often incomplete or cannot be assessed (e.g. neurocognitive abnormalities) and in postnatal cases with complex or atypical phenotypes.
The workshop has been designed around a problem-solving learning, with two brief lectures aimed at providing practical guidelines to correctly interpreted variants in a prenatal and postnatal setting, and a hands-on session where participants will be engaged with a live Q&A session aimed at solving instructive real cases.
Room: Clyde Auditorium
More information will be available in March/April 2023.
Room: Hall 2
Chairs: Christian Gilissen, Can Ding
The goal of the workshop is to discuss technical and interpretation challenges for variants in a diagnostic setting so participants will be able to prevent mistakes in the analysis and interpretation of variants from NGS data. During the workshop participants will engage with the speakers through interactive presentations and discussions of case studies.
Room: Lomond Auditorium
Chairs: Tara Clancy, Michael Parker
This workshop will provide participants with the opportunity
1) to find out more about and to discuss the ethical issues which genetics/genomics raises for patients, families, scientists, clinicians and researchers and
2) to learn from real life (anonymised) cases.
The learning outcomes will be developing
1) a deeper understanding of the ethical dimensions of good practice and
2) an appreciation of the skill of using experiences to help with reflective practice.
Room: M1
Chairs: Francesca Forzano, Robert Taylor
Workshop focus:
What is our impact on climate change? What can professionals in genetics do to minimize this impact, whether in clinic or in the lab?
What is the impact of climate change on human health and which are the genomic implications?
Which might be avenues to explore for future research?
Programme:
1. Measures of climate change and implications for human life – challenging the resilience of the planet and ecosystems.
Hayley Fowler (Professor of Climate Change Impacts, Newcastle University)
2. Net zero emissions in healthcare, examples from UK NHS
Martin Farley (Sustainable Laboratory Manager, University College London)
3. Healthcare impact of climate change, particularly related to the heath. How people react to heat, is there a genetic reason for different reactions? Can we identify ppl who might respond poorly, so to be able to protect them more?
Chantal Babb de Villiers (Senior Policy Analyst, The PHG Foundation)
4. Round Table: We will build in the bigger picture with talks, and discuss potential solutions in the round table.
Room: Forth Room
Chairs: Cristina Rodriguez-Antona, Henk Jan Guchelaar
This workshop provides basic concepts in Pharmacogenetics and includes a debate about clinical implementation. In addition, patient advocates organization will provide a testimony.
Programme:
INTRODUCTION
– What is PGx and where do we stand?
– Testimony from patient advocates for DPYD/DPD testing
DEBATE: Pharmacogenetics: The time for implementation is now? Pros versus Cons
– Interaction between debaters and audience
ROUND TABLE
– Results of polling system
– Questions from audience & online chat
Room: Hall 1
Chairs: Pablo Lapunzina, Jet Bliek
The Workshop will focus on molecular testing of imprinting disorders. Attendants will gain knowledge about the general background and pittfalls of diagnostic testing for imprinting disorders. A general introduction on ID’s and molecular diagnostics will be followed by 3-4 short descriptions of cases with a challenging molecular outcome.
14:00 – 15:30 hrs | Get2Gether IVDR
Room: Boisdale
IVDR is a challenge for all of us, the greatest challenge is keeping “orphan” diagnostics available
Hosts: Els Dequeker, Milan Macek, Gunnar Douzgos Houge
This Get2gether session focuses on the in vitro diagnostic regulation, IVDR, which has been in force since May 2022. This regulation brings many changes, including many definitions, new routes for conformity assessment, new designations for notified bodies and, for the first time, new requirements for health institutions developing in-home IVD devices. For different stakeholders, such as IVD manufacturers, IVD industry suppliers, and health institutions, there are still many obstacles to overcome and ambiguities to address.
This Get2gether is aimed at informing and explaining frequently asked questions within the genetic laboratories, what steps ESHG has taken in function of ‘orphan’ diagnostics, how a process to CE marking takes place, and how industry and genetic laboratories can work together.
The session will conclude with a general discussion with a panel of experts from different stakeholders based on pre-prepared and shared questions.
Attendees will learn about:
- Requirements and implications of the IVD regulation
- Understanding the implications for industry and health institutions
- Opinions, tips and tricks from different stakeholders on to working on IVDR compliance
Format:
Get2gether session speakers will have 20 minutes each to discuss their topic. The last 30 min will be given to a panelists with different stakeholders, such as lab staff, clinicians, industry staff, notified bodies, competent authorities, …to ask their view, tips and tricks to work together to IVDR compliance. We also like to ask the opinion of the audience with asking poll-questions.
Programme:
Welcome
Speakers: (3×20 min including 3 questions of audience)
- Insight into the main elements of IVDR and initiatives ESHG took to help genetic diagnostic laboratories (Els Dequeker, University of Leuven, Liaison for the ESHG in the Task Force of IVDR Biomed Alliance)
- Process to CE-marking for a genetic test (Alex Laan, Head of the IVD Notified Body BSI The Netherlands)
- Where can genetic diagnostic laboratories help industry and vice versa (Maurizio Suppo, Co-owner/VP QARAD)
Panel discussion
14:00 – 15:30 hrs | Corporate Satellites
15:30 – 15:45 hrs | Fruit Break, Exhibition, Poster Viewing
15:45 – 16:45 hrs | Poster Viewing with Authors – Group D
17:00 – 18:30 hrs | Concurrent Symposia S16-S20 & Educational Session E13-E14
Room: Hall 5
Chairs: TBA
S16.1 Systematically editing the human genome at scale
Greg Findlay;
United Kingdom
S16.2 Novel high throughput functional genomics approaches
Jozef Gecz
Australia
S16.3 Functional characterization of genetic variation affecting expression
Tuuli Lappalainen;
Sweden
Room: Clyde Auditorium
Chairs: Christian Gilissen and Rob Taylor
S17.1 Diagnostic applications of long-read RNAseq
Mina Ryten;
United Kingdom
S17.2 Toward improved diagnosis of genetic disease with nanopore long-read sequencing
Ira Deveson;
Australia
S17.3 Characterisation of the 22q11.2 Low copy repeats
Joris Vermeesch;
Belgium
Room: Lomond Auditorium
Chairs: Juliana Miranda Cerqueira and Rita Matos
S18.1 Training researchers to engage with patients: the importance of co-creation
Emma Dorris;
Ireland
S18.2 Engaging patients in clinical trials endpoints: A Gaucher Disease Registry perspective
Tanya Collin-Histed;
United Kingdom
S18.3 Inclusive genetics research with people with intellectual disability
Elizabeth Palmer;
Australia
Room: Forth Room
Chairs: Karoline Kuchenbaecker and Rhys Dore
S19.1 Mexican Biobank advances population and medical genomics of diverse ancestries
Mashaal Sohail;
Mexico
S19.2 Population genetics in an era of genomic health
Eimear Kenny;
United States
S19.3 BioBank Japan and what we have learnt so far
Yukinori Okada;
Japan
Room: Hall 1
Chairs: TBA
S20.1 Susceptibility to pediatric cancer
William D Foulkes;
Canada
S20.2 Precision medicine for advanced pediatric tumors
Pablo Berlanga;
France
S20.3 Characterizing the mutational consequences of therapy in childhood cancer survivors using single-cell genome sequencing
Ruben van Boxtel;
Netherlands
Room: Hall 2
Chairs: Alexander Hoischen
E13.1 Naked-mole rat and aging
Vera Gorbunova;
Untited States
E13.2 Evolution of somatic mutation rates
Alex Cagan;
Untited Kingdom
Room: M1
Chairs: Alexandre Reymond
E14.1 Enhancer-promoter interactions
Luca Giorgetti;
Switzerland
E14.2 Resolution of regulatory conflicts through genome 3D-restructuring
Michael Robson;
Germany
20:00 | ESHG Networking Evening (at own expense)
*An asterisk indicates that the presenter is an Early Career Award Candidate
Note that the programme is subject to change, and will be updated continuously up to the conference